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Sekinger E.A., Moqtaderi Z., and Struhl K., 2005. Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast. Mol. Cell 18: 735-748.

Shi Y., Lan E., Matson C., Mulligan P., Whetstine J.R., Cole P.A., Casero R.A., and Shi Y., 2004. Histone demethylation mediated by the nuclear amine oxidase homolog LSD1. Cell 119: 941-953.

Shi Y.J., Matson C., Lan E., Iwase S., Baba T., and Shi Y., 2005. Regulation of LSD 1 histone demethylase activity by its associated factors. Mol. Cell. 19: 857-864.

Shiio Y. and Eisenman R.N., 2003. Histone sumoylation is associated with transcriptional repression. Proc. Natl. Acad. Sci. 100: 13225-13230.

Shim E.Y., Woodcock C., and Zaret K.S. 1998. Nucleosome positioning by the winged helix transcription factor HNF3. Genes Dev. 12: 5-10.

Shogren-Knaak M., Ishii H., Sun J.M., Pazin M.J., Davie J.R., and Peterson C.L., 2006. Histone H4-K16 acetylation controls chromatin structure and protein interactions. Science 311: 844-847.

Sims. R.J.. Belotserkovskaya R., and Reinberg D., 2004. Elongation by RNA polymerase II: The short and long of it. Genes Dev. 18: 2437-2468.

Sims R.J., Chen C.F., Santos-Rosa H., Kouzarides T., Patel S.S., and Reinberg D., 2006. Human but not yeast CHD1 binds directly and selectively to histone H3 methylated at lysine 4 via its tandem chromodomains. J. Biol. Chem. 51: 41789-41792.

Soloaga A., Thomson S., Wiggin G.R., Rampersaud N., Dyson M.H., Hazzalin C.A., Mahadevan L.C., and Arthur J.S., 2003. MSK2 and MSK1 mediate the mitogen- and stress-induced phosphorylation ofhistone H3 and HMG-14. EMBO J. 22: 2788-2797.

Sterner D.E. and Berger S.L., 2000. Acetylation of histones and transcription-related factors. Microbiol. Mol. Biol. Rev. 64: 435-459.

Strahl B.D. and Allis C.D., 2000. The language of covalent histone modifications. Nature 403: 41-45.

Strahl B.D., Briggs S.D., Brame C.J., Caldwell J.A., Koh S.S., Ma H., Cook R.G., Shabanowitz J., Hunt D.E., Stallcup M.R., and Allis C.D., 2001. Methylation ofhistone H4 at arginine 3 occurs in vivo and is mediated by the nuclear receptor coactivator PRMT1. Curr. Biol. 26: 996-1000.

Sun Z.W. and Allis C.D., 2002. Ubiquitination ofhistone H2B regulates H3 methylation and gene silencing in yeast. Nature 418: 104-108.

Svaren J., Schmitz J., and Horz W. 1994. The transactivation domain of Pho4 is required for nucleosome disruption at the PH05 promoter. EMBO J. 13: 4856-4862.

Taunton J., Hassig C.A., and Schreiber S.L. 1996. A mammalian histone deacetylase related to the yeast transcriptional regulator Rpd3p. Science 111: 408-411.

Trewick S.C., McLaughlin P.J., and Allshire R.C., 2005. Methylation: Lost in hydroxylation? EMBO Rep. 6: 315-320.

Tsukada Y., Fang J., Erdjument-Bromage H., Warren M.E., Borch-ers C.H., Tempst P., and Zhang Y., 2006. Histone demethylation by a family of JmjC domain-containing proteins. Nature 439: 811-816.

Turner B.M., 2000. Histone acetylation and an epigenetic code. Bioessays 22: 836-45.

Vakoc C.R., Mandat S.A., Olenchock B.A., and Blobel G.A., 2005. Histone H3 lysine 9 methylation and HP1* are associated with transcription elongation through mammalian chromatin. Mol. Cell 19: 381-391.

Vettese-Dadey M., Grant P.A., Hebbes T.R., Crane-Robinson C, Allis C.D., and Workman J.L. 1996. Acetylation ofhistone H4 plays a primary role in enhancing transcription factor binding to nucleosomal DNA in vitro. EMBO J. 15: 2508-2518.

Volpe T.A., Kidner C., Hall I.M., Teng G., Grewal S.L, and Mar-tienssen R.A., 2002. Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi. Science 297: 1833-1837.

Wang H., Wang L., Erdjument-Bromage H., Vidal M., Tempst P., Jones R.S., and Zhang Y., 2004. Role ofhistone H2Aubiquitination in Polycomb silencing. Nature 431: 873-878.

Wang H., Huang Z.Q., Xia L., Feng Q., Erdjument-Bromage H., Strahl B.D., Briggs S.D., Allis C.D., Wfong J., Tempst P., and Zhang Y., 2001. Methylation ofhistone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor. Science 293: 853-857.

Wang Y., Wysocka J., Sayegh J., Lee Y.H., Perlin J.R., Leonelli L., Sonbuchner L.S., McDonald C.H., Cook R.G., Dou Y., et al., 2004. Human PAD4 regulates histone arginine methylation levels via demethylimination. Science 306: 279-283.

Whetstine J.R., Noffice A., Lan F., Huarte M., Smolikov S., Chen Z., Spooner E., Li E., Zhang G., Colaiacovo M., and Shi Y., 2006. Reversal of histone lysine trimethylation by the JMJD2 family ofhistone demethylases. Cell 125: 467-481.

Wood A., Krogan N.J., Dover J., Schneider J., Heidt J., Boateng M.A., Dean K., Golshani A., Zhang Y., Greenblatt J.F., et al., 2003. Brel, an E3 ubiquitin ligase required for recruitment and substrate selection of Rad6 at a promoter. Mol Cell 11: 267-274.

Workman J.L. and Roeder R.G. 1987. Binding of transcription factor TFIID to the major late promoter during in vitro nucleosome assembly potentiates subsequent initiation by RNA polymerase II. Cell 51: 613-622.

Wysocka J., Allis C.D., and Coonrod S., 2006a. Histone arginine methylation and its dynamic regulation. Front. Biosci. 11: 344-355.

Yamane K., Toumazou C., Tsukada Y., Erdjument-Bromage H., Tempst P., Wong J., and Zhang Y., 2006. JHDM2A, a JmjC-contaimng H3K9 demethylase, facilitates transcription activation by androgen receptor. Cell 125: 483-495.

Yang X.J. and Seto E., 2003. Collaborative spirit ofhistone deacety-lases in regulating chromatin structure and gene expression. Curr. Opin. Genet. Dev. 13: 143-153.